--------------------------------------------------------------------------- For FTP and decompressing instruction see 00-read.me in the main directory [anonymous] --------------------------------------------------------------------------- THIS is PROfileGRAPH V1.3 - a graphical protein analysis tool - read PGDOC.TXT for program documentation this file only contains a list of files needed, last minute informations and features added in release V1.3: ------------------------------------------------------------------------ executable section: you need these files for running PROfileGRAPH documentary section: you need one of these files for understanding it source code section: you need these file + Turbo Pascal 5.5 for modifying and recompiling it. executable section: - PROGRAPH.EXE the main program - PROGRAPH.TAB the startup amino-acid parameter table - * .TAB perhaps some additional tables - PROGRAPH.ANA standard analysis file - PROGRAPH.PIF PIF file for use with MS-WINDOWS 3.0 - PROGRAPH.ICO Icon file for use with MS-WINDOWS 3.0 - PG256 .CFG demo configuration file for 256 color SVGA - PG16S .CFG demo configuration file for 16 color SVGA - PG16 .CFG demo configuration file for 16 color EGA/VGA - PG2 .CFG demo configuration file for b/w - * .BGI graphics drivers (copyright BORLAND) - SVGABGI .ZIP SVGA drivers (copyright Jordan Hargrave) - MYPR$HUM.DAT test sequence file in UWGCG-format - TPGLVIEW.EXE TPGL file viewer - TPGLTOPS.EXE TPGL to POSTSCRIPTTM - Converter - TPGLPRT .BAT needed for 'special print' feature documentation section - PGDOC .TXT documentation in ASCII-format - PGDOC .DOC documentation in MS-WinWord format - PGDOC .PS documentation in POSTSCRIPTTM format - PG_PAPER.DOC paper decribing PROFILEGRAPH in MS-WinWord format source code section: - PROGRAPH.PAS the main program - PG_TYPE .PAS type declaration unit - PG_INIT .PAS variable initialization unit - PG_CALC .PAS calculation unit - PG_WHEEL.PAS helical wheel unit - POPUP .PAS pop-up menu unit - POPAPP .PAS pop-up menu applications unit - GRUTIL .PAS graphics utility unit - FILUTIL .PAS file utility unit - OVR_INIT.PAS overlay initialization unit - SEQ .PAS sequence utility unit - HCOPY .PAS hard copy utility unit - MOUSE .PAS Microsoft mouse utility unit - TPGL .PAS TPGL-creation unit - UREADSEQ.PAS Don Gilbert's READSEQ unit (converted for use with TP5) - TPGLVIEW.PAS TPGL file viewer - TPGLTOPS.PAS TPGL to POSTSCRIPTTM converter ------------------------------------------------------------------------ new features: * full SVGA support using J. Hargraves SVGA-drivers. * PROfileGRAPH includes a new MOUSE-unit to provide mouse-usage in SVGA modes (not trivial) * new feature for temporarily visiting DOS * new feature for analyzing amphipathic structures * new TPGL to POSTSCRIPT converter * automatic use of the above converter for getting POSTSCRIPT output * use of multiple configuration files for personal preferences * PROfileGRAPH now works with overlays * bug fixed in printer drivers for hardcopy * some minor bug fixes ------------------------------------------------------------------------ last minute informations: * since PROfileGRAPH now uses overlays this has to be accounted for when recompiling it. All units are compiled with compiler options $O+ (overlays allowed) $F+ (far coding) the program expects its overlay file appended to the .EXE file. to provide this, one has to COPY/b PROGRAPH.EXE+PROGRAPH.OVR after compiling the program. * in the documentary section, paragraphs that have major changes compared to the previous release are marked with bars at the left side. If you need the documentation in other formats, contact me at the address given below. ------------------------------------------------------------------------ ANNOUNCEMENT a new release of COMAP will appear together with PROfileGRAPH V1.3 COMAP uses the same graphical user interface and helps in the restriction mapping of relatively small DNA fragments ( program will disintegrate if applied to YACs :-) I am not sure if it really useful, but at our site some people really use it, and it is for sure fun to try. ------------------------------------------------------------------------ Authors address: Kay Oliver Hofmann khofmann@biomed.biolan.uni-koeln.de Institut fuer Biochemie (med. Fak.) Universitaet Koeln Joseph Stelzmann Str. 52 D-5000 Koeln 41 Germany